Auswahl an Publikationen von und mit Mitarbeitern des Instituts für digitale Medizin
Bayas A, Mansmann U, Ön BI, Hoffmann VS, Berthele A, Mühlau M, Kowarik MC, Krumbholz M, Senel M, Steuerwald V, Naumann M, Hartberger J, Kerschensteiner M, Oswald E, Ruschil C, Ziemann U, Tumani H, Vardakas I, Albashiti F, Kramer F, Soto-Rey I, Spengler H, Mayer G, Kestler HA, Kohlbacher O, Hagedorn M, Boeker M, Kuhn K, Buchka S, Kohlmayer F, Kirschke JS, Behrens L, Zimmermann H, Bender B, Sollmann N, Havla J, Hemmer B; ProVal-MS study group. Prospective study validating a multidimensional treatment decision score predicting the 24-month outcome in untreated patients with clinically isolated syndrome and early relapsing-remitting multiple sclerosis, the ProVal-MS study. Neurol Res Pract. 2024 Mar 7;6(1):15. doi: 10.1186/s42466-024-00310-x. PMID: 38449051; PMCID: PMC10918966.
Pigat L, Geisler BP, Sheikhalishahi S, Sander J, Kaspar M, Schmutz M, Rohr SO, Wild CM, Goss S, Zaghdoudi S, Hinske LC. Predicting Hypoxia Using Machine Learning: Systematic Review. JMIR Med Inform. 2024 Feb 2;12:e50642. doi: 10.2196/50642.
Schwarz M, Hinske LC, Mansmann U, & Albashiti F. Designing an ML Auditing Criteria Catalog as Starting Point for the Development of a Framework. IEEE Access, vol. 12, pp. 39953-39967, 2024 Jan 25. doi:10.1109/access.2024.3375763.
Sheikhalishahi S, Kaspar M, Zaghdoudi S, Sander J, Simon P, Geisler BP, Lange D, Hinske LC. Predicting Successful Weaning from Mechanical Ventilation by Reduction in Positive End-expiratory Pressure Level Using Machine Learning. PLOS Digit Health. 2024 Mar 27;3(3):e0000478. doi: 10.1371/journal.pdig.0000478. eCollection 2024.
Lutz S, D'angelo A, Hammerl S, Schmutz M, Claus R, Fischer N, Kramer F, Hammoud Z
Unveiling the Digital Evolution of Molecular Tumor Boards https://doi.org/10.1007/s11523-024-01109-1 IF: 4.4
Ballhausen H, Hinske LC. Federated Secure Computing. Informatics. 2023; 10(4):83. doi:10.3390/informatics10040083.
Ghiani A, Kneidinger N, Neurohr C, Frank S, Hinske LC, Schneider C, Michel S, Irlbeck M. Mechanical Power Density Predicts Prolonged Ventilation Following Double Lung Transplantation. Transpl Int. 2023 Sep 20;36:11506. doi: 10.3389/ti.2023.11506. PMID: 37799668; PMCID: PMC10548550.
Hartmann D, Schmid V, Meyer P, Auer F, Soto-Rey I, Müller D, Kramer F. MISM: A Medical Image Segmentation Metric for Evaluation of Weak Labeled Data. Diagnostics (Basel). 2023 Aug 8;13(16):2618. doi: 10.3390/diagnostics13162618. PMID: 37627877; PMCID: PMC10453729.
Huss R, Raffler J, Märkl B. Artificial intelligence and digital biomarker in precision pathology guiding immune therapy selection and precision oncology. Cancer Rep (Hoboken). 2023 Jul;6(7):e1796. doi: 10.1002/cnr2.1796. Epub 2023 Feb 22. PMID: 36813293; PMCID: PMC10363837.
Köpke MB, Wild CM, Schneider M, Pochert N, Schneider F, Sagasser J, Kühn T, Untch M, Hinske C, Reiger M, Traidl-Hoffmann C, Dannecker C, Jeschke U, Ditsch N. Elderly and Patients with Large Breast Volume Have an Increased Risk of Seroma Formation after Mastectomy-Results of the SerMa Pilot Study. Cancers (Basel). 2023 Jul 13;15(14):3606. doi: 10.3390/cancers15143606. PMID: 37509269; PMCID: PMC10377181.
Kuo TT, Pham A, Edelson ME, Kim J, Chan J, Gupta Y, Ohno-Machado L; R2D2 Consortium. Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. J Am Med Inform Assoc. 2023 May 19;30(6):1167-1178. doi: 10.1093/jamia/ocad049. PMID: 36916740; PMCID: PMC10198529.
Mercuri RLV, Conceição HB, Guardia GDA, Goldstein G, Vibranovski MD, Hinske LC, Galante PAF. Retro-miRs: novel and functional miRNAs originating from mRNA retrotransposition. Mob DNA. 2023 Sep 8;14(1):12. doi: 10.1186/s13100-023-00301-w. PMID: 37684690; PMCID: PMC10486083.
Pochert N, Schneider M, Köpke MB, Wild M, Mattmer A, Sagasser J, Golas MM, Banys-Paluchowski M, Metz A, Hinske C, Reiger M, Jeschke U, Dannecker C, Neumann A, Traidl-Hoffmann C, Untch M, Kühn T, Ditsch N. Th2/Th17 cell associated cytokines found in seroma fluids after breast cancer surgery. Arch Gynecol Obstet. 2023 Nov;308(5):1621-1627. doi: 10.1007/s00404-023-07074-w. Epub 2023 May 27. PMID: 37243864; PMCID: PMC10520137.
Rinaldi E, Drenkhahn C, Gebel B, Saleh K, Tönnies H, von Loewenich FD, Thoma N, Baier C, Boeker M, Hinske LC, Diaz LAP, Behnke M, Ingenerf J, Thun S. Towards interoperability in infection control: a standard data model for microbiology. Sci Data. 2023 Sep 23;10(1):654. doi: 10.1038/s41597-023-02560-x. Erratum in: Sci Data. 2023 Dec 20;10(1):919. doi: 10.1038/s41597-023-02853-1. PMID: 37741862; PMCID: PMC10517923.
Schneider F, Köpke M, Kuhn, C, Wild M, Schneider M, Dannecker Christian, Hinske LC, Jeschke Udo, Ditsch N. 323P Macrophage population analysis of the breast cancer microenvironment within the context of seroma formation after mastectomy (SerMa pilot study). Annals of Oncology. 2023;34. S313. ISSN 0923-7534, doi:10.1016/j.annonc.2023.09.519.
Wischmann J, Kremer P, Hinske L, Tomasi R, Becker-Pennrich AS, Kellert L. The RAPID-score: Risk Assessment and PredIction of Delirium in acute stroke patients based on very early clinical parameters. Front Neurol. 2023 Dec 15;14:1306520. doi: 10.3389/fneur.2023.1306520. PMID: 38162448; PMCID: PMC10756062.
Wünsch M, Sauer C, Callahan P, Hinske C, Boulesteix A. From RNA sequencing measurements to the final results: a practical guide to navigating the choices and uncertainties of gene set analysis. WIREs Computational Statistics, Bd. 16, Nr. 1. 2023. doi:10.1002/wics.1643.
Müller D, Hartmann D, Meyer P, Auer F, Soto-Rey I, Kramer F. MISeval: A Metric Library for Medical Image Segmentation Evaluation. Stud Health Technol Inform. 2022 May 25;294:33-37. doi: 10.3233/SHTI220391. PMID: 35612011.
Müller D, Soto-Rey I, Kramer F. An Analysis on Ensemble Learning optimized Medical Image Classification with Deep Convolutional Neural Networks. IEEE Access, vol. 10, pp. 66467-66480, 2022. doi: 10.1109/ACCESS.2022.3182399.
Müller D, Soto-Rey I, Kramer F. Towards a guideline for evaluation metrics in medical image segmentation. BMC Res Notes. 2022 Jun 20;15(1):210. doi: 10.1186/s13104-022-06096-y. PMID: 35725483; PMCID: PMC9208116.
Surendran P, Stewart ID, Au Yeung VPW, Pietzner M, Raffler J, Wörheide MA, Li C, Smith RF, Wittemans LBL, Bomba L, Menni C, Zierer J, Rossi N, Sheridan PA, Watkins NA, Mangino M, Hysi PG, Di Angelantonio E, Falchi M, Spector TD, Soranzo N, Michelotti GA, Arlt W, Lotta LA, Denaxas S, Hemingway H, Gamazon ER, Howson JMM, Wood AM, Danesh J, Wareham NJ, Kastenmüller G, Fauman EB, Suhre K, Butterworth AS, Langenberg C. Rare and common genetic determinants of metabolic individuality and their effects on human health. Nat Med. 2022 Nov;28(11):2321-2332. doi: 10.1038/s41591-022-02046-0. Epub 2022 Nov 10. PMID: 36357675; PMCID: PMC9671801.
Weinisch P, Fiamoncini J, Schranner D, Raffler J, Skurk T, Rist MJ, Römisch-Margl W, Prehn C, Adamski J, Hauner H, Daniel H, Suhre K, Kastenmüller G. Dynamic patterns of postprandial metabolic responses to three dietary challenges. Front Nutr. 2022 Sep 22;9:933526. doi: 10.3389/fnut.2022.933526. PMID: 36211489; PMCID: PMC9540193.
Pietzner M, Wheeler E, Carrasco-Zanini J, Cortes A, Koprulu M, Wörheide MA, Oerton E, Cook J, Stewart ID, Kerrison ND, Luan J, Raffler J, Arnold M, Arlt W, O'Rahilly S, Kastenmüller G, Gamazon ER, Hingorani AD, Scott RA, Wareham NJ, Langenberg C. Mapping the proteo-genomic convergence of human diseases. Science. 2021 Nov 12;374(6569):eabj1541. doi: 10.1126/science.abj1541. Epub 2021 Nov 12. PMID: 34648354; PMCID: PMC9904207.